AT4G16420.2
with_OMAT_gene
<html><body><title>AT4G16420.2</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u421642002000i/AT4G16420.2.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u421642002000i/AT4G16420.2.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u421642002000i/AT4G16420.2.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u422986001000i">AT4G29860.1</a></td><td>0.917571</td><td>EMB2757 (EMBRYO DEFECTIVE 2757)</td><td>OMAT4P108350</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u222596401000i">AT2G25964.1</a></td><td>0.888334</td><td>unknown protein</td><td>OMAT2P104830</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u525556001000i">AT5G55560.1</a></td><td>0.886704</td><td>protein kinase family protein</td><td>OMAT5P114520</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u221878001000i">AT2G18780.1</a></td><td>0.880091</td><td>F-box family protein</td><td>OMAT2P102680</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321188001000i">AT3G11880.1</a></td><td>0.853026</td><td>unknown protein</td><td>OMAT3P004160</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420102301000i">AT4G01023.1</a></td><td>0.851192</td><td>zinc finger (C3HC4-type RING finger) family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320497001000i">AT3G04970.1</a></td><td>0.845514</td><td>zinc finger (DHHC type) family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u322976401000i">AT3G29764.1</a></td><td>0.843727</td><td>pseudogene, DNA-directed RNA polymerase Beta chain (fragment), blastp match of 55% identity and 1.5e-06 P-value to GP|6006460|emb|CAB56784.1||AJ012560 RNA polymerase {Ginkgo biloba}</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u423075001000i">AT4G30750.1</a></td><td>0.83805</td><td>unknown protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127878002000i">AT1G78780.2</a></td><td>0.837561</td><td>pathogenesis-related family protein</td><td>OMAT1P120680</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u322566001000i">AT3G25660.1</a></td><td>-0.852743</td><td>glutamyl-tRNA(Gln) amidotransferase, putative</td><td>OMAT3P108340</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u522600001000i">AT5G26000.1</a></td><td>-0.842663</td><td>TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1)</td><td>OMAT5P107780</td><td>-</td><td>OMAT5P008870</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223854001000i">AT2G38540.1</a></td><td>-0.835247</td><td>LP1</td><td>OMAT2P010090</td><td>-</td><td>OMAT2P109260</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u121862002000i">AT1G18620.2</a></td><td>-0.835223</td><td>unknown protein</td><td>OMAT1P006840</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120732001000i">AT1G07320.1</a></td><td>-0.826035</td><td>RPL4</td><td>OMAT1P002350</td><td>-</td><td>OMAT1P102170</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120854001000i">AT1G08540.1</a></td><td>-0.814568</td><td>SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2)</td><td>OMAT1P002850</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325691001000i">AT3G56910.1</a></td><td>-0.81332</td><td>PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)</td><td>OMAT3P113940</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u224807001000i">AT2G48070.1</a></td><td>-0.805269</td><td>RPH1 (RESISTANCE TO PHYTOPHTHORA 1)</td><td>OMAT2P013940</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223380001000i">AT2G33800.1</a></td><td>-0.795348</td><td>ribosomal protein S5 family protein</td><td>OMAT2P107410</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223443001000i">AT2G34430.1</a></td><td>-0.792121</td><td>LHB1B1</td><td>OMAT2P008520</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u421642002000i/AT4G16420.2-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 7.07e-07</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>7.07e-07 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050794</td><td>regulation of cellular process</td><td>26/200</td><td>1.70</td><td>2.75e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0051716</td><td>cellular response to stimulus</td><td>10/200</td><td>2.26</td><td>5.16e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006950</td><td>response to stress</td><td>21/200</td><td>1.69</td><td>6.60e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=response%20stress">2.13E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0051252</td><td>regulation of RNA metabolic process</td><td>11/200</td><td>2.10</td><td>6.63e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050789</td><td>regulation of biological process</td><td>27/200</td><td>1.56</td><td>7.75e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=regulation%20biological%20process">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0032774</td><td>RNA biosynthetic process</td><td>11/200</td><td>2.01</td><td>9.43e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>26/200</td><td>1.66</td><td>3.84e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=nucleus">3.64E-21</a></td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0003677</td><td>DNA binding</td><td>28/200</td><td>2.02</td><td>1.28e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=binding">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003700</td><td>transcription factor activity</td><td>22/200</td><td>2.18</td><td>2.08e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=transcription%20factor%20activity">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0005515</td><td>protein binding</td><td>29/200</td><td>1.85</td><td>4.40e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=protein%20binding">1.67E-15</a></td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>129/200</td><td>1.66</td><td>5.94e-14</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=inflorescence%20meristem">7.38E-19</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>130/200</td><td>1.62</td><td>3.74e-13</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=meristem">5.93E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>132/200</td><td>1.56</td><td>3.12e-12</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=stem">4.71E-16</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>125/200</td><td>1.49</td><td>1.44e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>127/200</td><td>1.41</td><td>4.57e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=root">1.43E-16</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>127/200</td><td>1.41</td><td>4.63e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>112/200</td><td>1.45</td><td>2.17e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>116/200</td><td>1.43</td><td>2.53e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>118/200</td><td>1.41</td><td>4.27e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>126/200</td><td>1.36</td><td>5.88e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>116/200</td><td>1.40</td><td>8.47e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>106/200</td><td>1.44</td><td>9.16e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>131/200</td><td>1.33</td><td>1.08e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=fruit">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>131/200</td><td>1.33</td><td>1.08e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>130/200</td><td>1.33</td><td>1.55e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=seed">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>140/200</td><td>1.29</td><td>1.87e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>118/200</td><td>1.37</td><td>1.92e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>136/200</td><td>1.30</td><td>2.32e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=inflorescence">2.20E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>119/200</td><td>1.36</td><td>2.91e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>123/200</td><td>1.34</td><td>3.60e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=leaf">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>119/200</td><td>1.35</td><td>4.44e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=seedling">1.16E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>133/200</td><td>1.30</td><td>4.58e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>134/200</td><td>1.29</td><td>6.10e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=flower">1.14E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>126/200</td><td>1.30</td><td>1.04e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>123/200</td><td>1.30</td><td>1.63e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>123/200</td><td>1.30</td><td>1.63e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>111/200</td><td>1.35</td><td>1.67e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>53/200</td><td>1.63</td><td>7.40e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>53/200</td><td>1.63</td><td>7.40e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>100/200</td><td>1.31</td><td>2.22e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>45/200</td><td>1.54</td><td>9.45e-04</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>122/200</td><td>1.48</td><td>5.18e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>118/200</td><td>1.48</td><td>1.29e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>121/200</td><td>1.46</td><td>2.01e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>127/200</td><td>1.41</td><td>4.81e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>127/200</td><td>1.40</td><td>6.54e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>117/200</td><td>1.43</td><td>2.12e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>118/200</td><td>1.40</td><td>4.82e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>118/200</td><td>1.40</td><td>4.88e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>132/200</td><td>1.34</td><td>6.86e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>135/200</td><td>1.32</td><td>7.07e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>118/200</td><td>1.39</td><td>7.45e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=vegetative%20growth">5.36E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>136/200</td><td>1.30</td><td>2.45e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=flower%20development%20stages">4.87E-19</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>108/200</td><td>1.40</td><td>2.89e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>108/200</td><td>1.40</td><td>2.97e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>128/200</td><td>1.32</td><td>3.47e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0007605</td><td>androecium developmental stages</td><td>47/200</td><td>1.61</td><td>3.03e-04</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>29/200</td><td>2.00</td><td>1.23e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=transcription">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mediated</td><td>-</td><td>11/200</td><td>3.11</td><td>2.52e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=mediated">1.52E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nuclear</td><td>-</td><td>10/200</td><td>3.25</td><td>2.91e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=nuclear">9.36E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cellular_component</td><td>-</td><td>68/200</td><td>1.40</td><td>8.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>factor</td><td>-</td><td>29/200</td><td>1.66</td><td>2.57e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=factor">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transport</td><td>-</td><td>18/200</td><td>1.85</td><td>4.26e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=transport">5.36E-10</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>signal</td><td>-</td><td>10/200</td><td>2.28</td><td>4.91e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=signal">1.02E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>finger</td><td>-</td><td>17/200</td><td>1.84</td><td>5.55e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>11/200</td><td>2.13</td><td>6.01e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>leucine</td><td>-</td><td>11/200</td><td>2.10</td><td>6.86e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=leucine">5.36E-10</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>22/200</td><td>1.66</td><td>6.91e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G16420&keyword=regulation">1.97E-15</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>molecular_function</td><td>-</td><td>65/200</td><td>1.29</td><td>8.36e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
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